October 19, 2009
- MEGAN MEtaGenome ANalyzer. A stand-alone metagenome analysis tool.
- Metagenomics and Our Microbial Planet A website on metagenomics and the vital role of microbes on Earth from the National Academies.
- The New Science of Metagenomics: Revealing the Secrets of Our Microbial Planet A report released by the National Research Council in March 2007. Also, see the Report In Brief.
- IMG/M The Integrated Microbial Genomes system, for metagenome analysis by the DOE-JGI.
- CAMERA Cyberinfrastructure for Metagenomics, data repository and tools for metagenomics research.
- A good overview of metagenomics from the Science Creative Quarterly
- list of Metagenome Projects from genomesonline.org
- MG-RAST publicly available, free, metagenomics annotation pipeline and repository for pyrosequences, Sanger sequences, and other sequence approaches.
- Human microbiome project
- MetaHIT official website for the EU-funded project : Metagenomics of the Human Intestinal Tract
- Annotathon Bioinformatics Training Through Metagenomic Sequence Annotation
- Metagenomics Metagenomics research and applications

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